Stem-loop ppy-mir-181b-2

Accession

MI0014845

Description

Pongo pygmaeus ppy-mir-181b-2 precursor miRNA

Gene family

MIPF0000007; mir-181

Sequence

cugauggcugcacucAACAUUCAUUGCUGUCGGUGGGUuugagucugaaucaacucacugaucgaugaaugcaaacugcggaccaaaca
....((((((((.....(((((((((..(((((((((((.((.......)))))))))))))))))))))).....))))).)))....

Structure

cuga   -     cucAA         CU           u  gu 
    ugg cugca     CAUUCAUUG  GUCGGUGGGUu ga  c
    ||| |||||     |||||||||  ||||||||||| ||  u
    acc ggcgu     guaaguagc  uagucacucaa cu  g
acaa   a     caaac         --           -  aa 

Annotation confidence Not enough data

Genome context

chr9: 121589374-121589462 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ppy-mir-181b-2

Mature ppy-miR-181b

• Accession: MIMAT0002628
• Description: Pongo pygmaeus ppy-miR-181b mature miRNA
• Sequence: 16 - AACAUUCAUUGCUGUCGGUGGGU - 38
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64