Stem-loop ppy-mir-149

Accession

MI0014839

Description

Pongo pygmaeus ppy-mir-149 precursor miRNA

Gene family

MIPF0000274; mir-149

Sequence

gccggcgcccgagcUCUGGCUCCGUGUCUUCACUCCCguguuuguccaaggagggagggagggacgggggcugugcuggggcagc
....((((((.(((.(.(.((((((.(((((.(((((.(.((.....)).).)))))))))).)))))).).).))).)))).))

Structure

gccg  -    g   U U G      G     A     g g  u 
    gc gccc agc C G CUCCGU UCUUC CUCCC u uu g
    || |||| ||| | | |||||| ||||| ||||| | || u
    cg cggg ucg g c ggggca ggagg gaggg g aa c
----  a    g   u u g      g     -     a g  c 

Annotation confidence Not enough data

Genome context

chr2B: 133208988-133209072 [+]

Mature ppy-miR-149

• Accession: MIMAT0015773
• Description: Pongo pygmaeus ppy-miR-149 mature miRNA
• Sequence: 15 - UCUGGCUCCGUGUCUUCACUCCC - 37
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64