Stem-loop ppy-mir-140

Accession

MI0014832

Description

Pongo pygmaeus ppy-mir-140 precursor miRNA

Gene family

MIPF0000085; mir-140

Sequence

ugugucucucucuguguccugcCAGUGGUUUUACCCUAUGGUAGguuacgucaugcuguucUACCACAGGGUAGAACCACGGacaggauaccggggcacc
.(((((((.....((((((((((.(((((((((((((.(((((((.((.((...)))).))))))).))))))))))))))).)))))))).))))))).

Structure

u       ucucu        -  A             A       u  c  c 
 gugucuc     guguccug cC GUGGUUUUACCCU UGGUAGg ua gu  
 |||||||     |||||||| || ||||||||||||| ||||||| || || a
 cacgggg     cauaggac GG CACCAAGAUGGGA ACCAUcu gu cg  
c       ----c        a  -             C       u  -  u 

Annotation confidence Not enough data

Genome context

chr16: 57411201-57411300 [+]

Mature ppy-miR-140-5p

• Accession: MIMAT0015763
• Description: Pongo pygmaeus ppy-miR-140-5p mature miRNA
• Sequence: 23 - CAGUGGUUUUACCCUAUGGUAG - 44
• Evidence: not_experimental

Mature ppy-miR-140-3p

• Accession: MIMAT0015764
• Description: Pongo pygmaeus ppy-miR-140-3p mature miRNA
• Sequence: 62 - UACCACAGGGUAGAACCACGG - 82
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64