miRBase entry: ppy-mir-105-2

Stem-loop ppy-mir-105-2

Accession

MI0014814

Description

Pongo pygmaeus ppy-mir-105-2 precursor miRNA

Gene family

MIPF0000074; mir-105

Sequence

ugugcaucguggUCAAAUGCUCAGACUCCUGUGGUggcugcuuaugcaccacggauguuugagcaugugcuauggugucua
...(((((((((.((.((((((((((..((((((((..........))))))))..)))))))))).)))))))))))...

Structure

ugu         U  A          UC        gcug 
   gcaucgugg CA AUGCUCAGAC  CUGUGGUg    c
   ||||||||| || ||||||||||  ||||||||     
   ugugguauc gu uacgaguuug  ggcaccac    u
auc         -  g          ua        guau

Annotation confidence Not enough data

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Genome context

chrX: 152526476-152526556 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from ppy-mir-105-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-105

Accession	MIMAT0002450
Description	Pongo pygmaeus ppy-miR-105 mature miRNA
Sequence	13 - UCAAAUGCUCAGACUCCUGUGGU - 35
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64