miRBase entry: ppy-mir-30d

Stem-loop ppy-mir-30d

Accession

MI0014804

Description

Pongo pygmaeus ppy-mir-30d precursor miRNA

Gene family

MIPF0000005; mir-30

Sequence

guuguUGUAAACAUCCCCGACUGGAAGcuguaagacacagcuaagcuuucagucagauguuugcugcuac
...((.(((((((((...(((((((((((..............))))))))))).))))))))).))...

Structure

guu  U         CCC           guaaga 
   gu GUAAACAUC   GACUGGAAGcu      c
   || |||||||||   |||||||||||       
   cg cguuuguag   cugacuuucga      a
cau  u         --a           aucgac

Annotation confidence Not enough data

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Genome context

chr8: 142869803-142869872 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ppy-mir-30d

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-30d

Accession	MIMAT0015738
Description	Pongo pygmaeus ppy-miR-30d mature miRNA
Sequence	6 - UGUAAACAUCCCCGACUGGAAG - 27
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64