Stem-loop ppy-mir-30b

Accession

MI0014802

Description

Pongo pygmaeus ppy-mir-30b precursor miRNA

Gene family

MIPF0000005; mir-30

Sequence

accaaguuucaguucaUGUAAACAUCCUACACUCAGCUguaauacauggauuggcugggagguggauguuuacuucagcugacuugga
.(((((..((((((...((((((((((.((.((((((((............))))))))..))))))))))))...))))))))))).

Structure

a     uu      caU          U  -A        uaaua 
 ccaag  ucaguu   GUAAACAUCC AC  CUCAGCUg     c
 |||||  ||||||   |||||||||| ||  ||||||||      
 gguuc  agucga   cauuuguagg ug  gggucggu     a
a     --      cuu          -  ga        uaggu 

Annotation confidence Not enough data

Genome context

chr8: 142865078-142865165 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ppy-mir-30b

Mature ppy-miR-30b

• Accession: MIMAT0015736
• Description: Pongo pygmaeus ppy-miR-30b mature miRNA
• Sequence: 17 - UGUAAACAUCCUACACUCAGCU - 38
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64