Stem-loop ppy-mir-27b

Accession

MI0014800

Description

Pongo pygmaeus ppy-mir-27b precursor miRNA

Gene family

MIPF0000036; mir-27

Sequence

accucucuaacaaggugcagagcuuagcugauuggugaacagugauugguuuccgcuuugUUCACAGUGGCUAAGUUCUGCaccugaagagaaggug
((((((((....(((((((((((((((((.((((.(((((((....(((...)))..))))))))))))))))))))))))))))..)))).)))).

Structure

-    -    aaca                 g    g       ugau   u 
 accu cucu    aggugcagagcuuagcu auug ugaacag    ugg  
 |||| ||||    ||||||||||||||||| |||| |||||||    ||| u
 ugga gaga    uccaCGUCUUGAAUCGG UGAC ACUUguu    gcc  
g    a    --ag                 -    -       --uc   u 

Annotation confidence Not enough data

Genome context

chr9: 91048811-91048907 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from ppy-mir-27b

Mature ppy-miR-27b

• Accession: MIMAT0015734
• Description: Pongo pygmaeus ppy-miR-27b mature miRNA
• Sequence: 61 - UUCACAGUGGCUAAGUUCUGC - 81
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64