Stem-loop ppy-let-7a-1

Accession

MI0014779

Description

Pongo pygmaeus ppy-let-7a-1 precursor miRNA

Gene family

MIPF0000002; let-7

Literature search

2 open access papers mention ppy-let-7a-1
(5 sentences)

Sequence

ugggaUGAGGUAGUAGGUUGUAUAGUUuuagggucacacccaccacugggagauaacuauacaaucuacugucuuuccua
(((((.(((((((((((((((((((((.....(((...((((....)))).)))))))))))))))))))))))))))))

Structure

     U                     uuagg   aca    c 
uggga GAGGUAGUAGGUUGUAUAGUU     guc   ccca c
||||| |||||||||||||||||||||     |||   ||||  
auccu uucugucaucuaacauaucaa     uag   gggu a
     -                     -----   --a    c 

Annotation confidence Not enough data

Genome context

chr9: 89894747-89894826 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from ppy-let-7a-1

Mature ppy-let-7a

• Accession: MIMAT0015721
• Description: Pongo pygmaeus ppy-let-7a mature miRNA
• Sequence: 6 - UGAGGUAGUAGGUUGUAUAGUU - 27
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64