miRBase entry: ssc-mir-744

Stem-loop ssc-mir-744


Accession
MI0014769
Description
Sus scrofa ssc-mir-744 precursor miRNA
Gene family
MIPF0000431; mir-744

Literature search
3 open access papers mention ssc-mir-744
(8 sentences)

Sequence

33 reads, 21 reads per million, 8 experiments
gcagggUGCGGGGCUAGGGCUAACAGCAgucuuacugaagguuuccuggaaaccacgcacaugcuguugccacuaaccuc
.........((((.((((((.(((((((...........((((((...)))))).......)))))))))).))).))))

Structure
gcagggUGC    C   -   U       gucuuacugaa      c 
         GGGG UAG GGC AACAGCA           gguuuc  
         |||| ||| ||| |||||||           |||||| u
         cucc auc ccg uugucgu           ccaaag  
---------    a   a   -       ----acacgca      g 


Annotation confidence Not enough data
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Genome context
chr12: 59358203-59358282 [+]

Database links

Mature ssc-miR-744

Accession MIMAT0015708
Description Sus scrofa ssc-miR-744 mature miRNA
Sequence 7 - UGCGGGGCUAGGGCUAACAGCA - 28
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 19917043
    MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing
    "Nielsen M, Hansen JH, Hedegaard J, Nielsen RO, Panitz F, Bendixen C, Thomsen B"
    "Anim Genet (2010) 41:159-168

  2. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100