miRBase entry: nvi-mir-3477

Stem-loop nvi-mir-3477


Accession
MI0014767
Description
Nasonia vitripennis nvi-mir-3477 precursor miRNA
Gene family
MIPF0001227; mir-3477


Sequence

gguagugucuguguagguaaucucaugcgguaacugugagcgugugaaaaacuauggcuCAUAUUACCUCGUGGGAUUUCccacccacuacc
(((((((...(((..((.(((((((((.(((((.(((((((..((.....))....)))))))))))).))))))))).))))).)))))))

Structure
       ucu   ua  u         c     c       --gu  g 
gguagug   gug  gg aaucucaug gguaa ugugagc    gu a
|||||||   |||  || ||||||||| ||||| |||||||    || a
ccaucac   cac  cC UUAGGGUGC CCAUU AUACucg    ca a
       --c   --  U         U     -       guau  a 


Annotation confidence Not enough data
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Genome context
GL340882.1: 830357-830448 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from nvi-mir-3477
Name Accession Chromosome Start End Strand Confidence




Database links

Mature nvi-miR-3477

Accession MIMAT0015706
Description Nasonia vitripennis nvi-miR-3477 mature miRNA
Sequence 60 - CAUAUUACCUCGUGGGAUUUC - 80
Evidence experimental
454 [1]

References

  1. PubMed ID: 20075255
    Functional and evolutionary insights from the genomes of three parasitoid Nasonia species
    "Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Beukeboom LW, Desplan C, Elsik CG, Grimmelikhuijzen CJ, Kitts P, Lynch JA, Murphy T, Oliveira DC, Smith CD, van"
    "Science (2010) 327:343-348