miRBase entry: nvi-mir-305

Stem-loop nvi-mir-305


Accession
MI0014747
Description
Nasonia vitripennis nvi-mir-305 precursor miRNA
Gene family
MIPF0000158; mir-305


Sequence

ggaggcugcauguuaAUUGUACUUCAUCAGGUGCUCUGgugauuuugauacccggugccuguuggagcgcaauucauaugauugugccuu
.(((((..(((((.((((((.(((((.((((((((..((((.......)))).)))))))).))))).)))))).))))).....)))))

Structure
g     ---ug     u      A     U        CU    au 
 gaggc     caugu aAUUGU CUUCA CAGGUGCU  Ggug  u
 |||||     ||||| |||||| ||||| ||||||||  ||||  u
 uuccg     guaua uuaacg gaggu guccgugg  ccau  u
-     uguua     c      c     u        -c    ag 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr4: 1482355-1482444 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from nvi-mir-305
Name Accession Chromosome Start End Strand Confidence




Database links

Mature nvi-miR-305

Accession MIMAT0015686
Description Nasonia vitripennis nvi-miR-305 mature miRNA
Sequence 16 - AUUGUACUUCAUCAGGUGCUCUG - 38
Evidence experimental
454 [1]

References

  1. PubMed ID: 20075255
    Functional and evolutionary insights from the genomes of three parasitoid Nasonia species
    "Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Beukeboom LW, Desplan C, Elsik CG, Grimmelikhuijzen CJ, Kitts P, Lynch JA, Murphy T, Oliveira DC, Smith CD, van"
    "Science (2010) 327:343-348