miRBase entry: nvi-mir-275

Stem-loop nvi-mir-275


Accession
MI0014746
Description
Nasonia vitripennis nvi-mir-275 precursor miRNA
Gene family
MIPF0000187; mir-275


Sequence

uuacguacagccaguuugcaacucgcgcuacuccgguacuuacgacugugcauucgauagUCAGGUACCUGAAGUAGCGCGCGcugcgacugga
..........((((((.(((.(.((((((((((.(((((((..((((((.......))))))))))))).).))))))))).).))))))))).

Structure
uuacguacag      u   a u         - c       ac      gc 
          ccaguu gca c cgcgcuacu c gguacuu  gacugu  a
          |||||| ||| | ||||||||| | |||||||  ||||||  u
          ggucag cgu G GCGCGAUGA G CCAUGGA  CUgaua  u
---------a      -   c C         A U       --      gc 


Annotation confidence Not enough data
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Genome context
chr4: 1482167-1482260 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from nvi-mir-275
Name Accession Chromosome Start End Strand Confidence




Database links

Mature nvi-miR-275

Accession MIMAT0015685
Description Nasonia vitripennis nvi-miR-275 mature miRNA
Sequence 61 - UCAGGUACCUGAAGUAGCGCGCG - 83
Evidence experimental
454 [1]

References

  1. PubMed ID: 20075255
    Functional and evolutionary insights from the genomes of three parasitoid Nasonia species
    "Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Beukeboom LW, Desplan C, Elsik CG, Grimmelikhuijzen CJ, Kitts P, Lynch JA, Murphy T, Oliveira DC, Smith CD, van"
    "Science (2010) 327:343-348