miRBase entry: nvi-mir-277

Stem-loop nvi-mir-277


Accession
MI0014744
Description
Nasonia vitripennis nvi-mir-277 precursor miRNA
Gene family
MIPF0000156; mir-277


Sequence

ggcaggcuggggcucgugccagaugcgcguuuacacgagagcccugaauacugUAAAUGCACUAUCUGGUACGACAucucuccugcc
((((((..((((.((((((((((((.(((((((((................))))))))).).)))))))))))..)))).))))))

Structure
      cu    -c           - c         cgagagc 
ggcagg  gggg  ucgugccagau g gcguuuaca       c
||||||  ||||  ||||||||||| | |||||||||        
ccgucc  cucu  AGCAUGGUCUA C CGUAAAUgu       c
      -u    AC           U A         cauaagu 


Annotation confidence Not enough data
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Genome context
chr4: 7978315-7978401 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from nvi-mir-277
Name Accession Chromosome Start End Strand Confidence




Database links

Mature nvi-miR-277

Accession MIMAT0015683
Description Nasonia vitripennis nvi-miR-277 mature miRNA
Sequence 54 - UAAAUGCACUAUCUGGUACGACA - 76
Evidence experimental
454 [1]

References

  1. PubMed ID: 20075255
    Functional and evolutionary insights from the genomes of three parasitoid Nasonia species
    "Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Beukeboom LW, Desplan C, Elsik CG, Grimmelikhuijzen CJ, Kitts P, Lynch JA, Murphy T, Oliveira DC, Smith CD, van"
    "Science (2010) 327:343-348