miRBase entry: nvi-mir-iab-8

Stem-loop nvi-mir-iab-8


Accession
MI0014735
Description
Nasonia vitripennis nvi-mir-iab-8 precursor miRNA
Gene family
MIPF0000854; mir-iab-8


Sequence

uccugUUACGUAUACUGAAGGUAUACCGgacagaaauacacucaggauacauucaguauacguacaggg
.(((((.((((((((((((.((((.((.((...........)).)))))).))))))))))))))))).

Structure
u     U            G    A  G  caga 
 ccugU ACGUAUACUGAA GUAU CC ga    a
 ||||| |||||||||||| |||| || ||    a
 ggaca ugcauaugacuu caua gg cu    u
g     -            a    -  a  caca 


Annotation confidence Not enough data
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Genome context
chr4: 6271855-6271923 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from nvi-mir-iab-8
Name Accession Chromosome Start End Strand Confidence




Database links

Mature nvi-miR-iab-8

Accession MIMAT0015674
Description Nasonia vitripennis nvi-miR-iab-8 mature miRNA
Sequence 6 - UUACGUAUACUGAAGGUAUACCG - 28
Evidence not_experimental

References

  1. PubMed ID: 20075255
    Functional and evolutionary insights from the genomes of three parasitoid Nasonia species
    "Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Beukeboom LW, Desplan C, Elsik CG, Grimmelikhuijzen CJ, Kitts P, Lynch JA, Murphy T, Oliveira DC, Smith CD, van"
    "Science (2010) 327:343-348