miRBase entry: nvi-mir-2b

Stem-loop nvi-mir-2b


Accession
MI0014728
Description
Nasonia vitripennis nvi-mir-2b precursor miRNA
Gene family
MIPF0000049; mir-2


Sequence

ucggcuguuucgcccgucagagugguugugauauggugcuauugaacgcaUAUCACAGCCAGCUUUGAUGUGCguaacaguucga
(((((((((.(((.(((((((((((((((((((((((........)).))))))))))))).)))))))).))).))))).))))

Structure
    -     u   c        -             -  gcu 
ucgg cuguu cgc cgucagag ugguugugauaug gu   a
|||| ||||| ||| |||||||| ||||||||||||| ||    
agcu gacaa gCG GUAGUUUC ACCGACACUAUac ca   u
    u     u   U        G             g  agu 


Annotation confidence Not enough data
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Genome context
chr1: 8080812-8080896 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from nvi-mir-2b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature nvi-miR-2b

Accession MIMAT0015667
Description Nasonia vitripennis nvi-miR-2b mature miRNA
Sequence 51 - UAUCACAGCCAGCUUUGAUGUGC - 73
Evidence experimental
454 [1]

References

  1. PubMed ID: 20075255
    Functional and evolutionary insights from the genomes of three parasitoid Nasonia species
    "Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Beukeboom LW, Desplan C, Elsik CG, Grimmelikhuijzen CJ, Kitts P, Lynch JA, Murphy T, Oliveira DC, Smith CD, van"
    "Science (2010) 327:343-348