miRBase entry: nvi-mir-33

Stem-loop nvi-mir-33


Accession
MI0014718
Description
Nasonia vitripennis nvi-mir-33 precursor miRNA
Gene family
MIPF0000070; mir-33


Sequence

uaugcaacgaaaauauugucugcuacgagaGUGCAUUGUAGUUGCAUUGcaugaauauuugaaagugcaguacuucugcagugcaacccuugugguuggcg
.................(((.((((((((.(((((((((((..(.(((((((............))))))).)..))))))))).)).)))))))).))).

Structure
uaugcaacgaaaauauu   u        a  -         UU C       gaaua 
                 guc gcuacgag GU GCAUUGUAG  G AUUGcau     u
                 ||| |||||||| || |||||||||  | |||||||      
                 cgg ugguguuc ca cgugacguc  c ugacgug     u
----------------g   u        c  a         uu a       aaagu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr1: 33184298-33184398 [-]

Database links

Mature nvi-miR-33

Accession MIMAT0015657
Description Nasonia vitripennis nvi-miR-33 mature miRNA
Sequence 31 - GUGCAUUGUAGUUGCAUUG - 49
Evidence not_experimental

References

  1. PubMed ID: 20075255
    Functional and evolutionary insights from the genomes of three parasitoid Nasonia species
    "Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Beukeboom LW, Desplan C, Elsik CG, Grimmelikhuijzen CJ, Kitts P, Lynch JA, Murphy T, Oliveira DC, Smith CD, van"
    "Science (2010) 327:343-348