miRBase entry: mmu-mir-3471-1

Stem-loop mmu-mir-3471-1


Accession
MI0014699
Symbol
MGI: Mir3471-1
Description
Mus musculus mmu-mir-3471-1 precursor miRNA
Gene family
MIPF0001053; mir-3471

Literature search
2 open access papers mention mmu-mir-3471-1
(2 sentences)

Sequence

4246 reads, 359 reads per million, 61 experiments
aaaggagcuucaguugagccuccaUGAGAUCCAACUGUAAGGCAUUuccucaauuagugcuguuaugcugcuaguguaugcucuguccaguuucuuuuuggagguauuuagagcuaugaguuuuccuuuua
((((((((((.((((..(((((((.((((...(((((..((((((.......((((((((......)).))))))..)))).))...)))))))))..)))))))......))))..))))..))))))..

Structure
--      --    -c    ----ga       -U    UCC     -UA  -    Uuccuca      -  ug 
  aaagga  gcuu  aguu      gccucca  GAGA   AACUG   AG GCAU       auuagu gc  u
  ||||||  ||||  ||||      |||||||  ||||   |||||   || ||||       |||||| ||   
  uuuccu  ugag  ucga      uggaggu  uucu   uugac   uc cgua       ugaucg cg  u
au      uu    ua    gauuua       uu    ---     cug  u    -----ug      u  ua 


Annotation confidence Not enough data
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Genome context
chr4: 10845500-10845630 [-]

Database links

Mature mmu-miR-3471

Accession MIMAT0015642
Description Mus musculus mmu-miR-3471 mature miRNA
Sequence 25 - UGAGAUCCAACUGUAAGGCAUU - 46
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 20215419
    MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
    "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
    "Mol Hum Reprod (2010) 16:463-471