Stem-loop sequence mmu-mir-3470a

Accession

MI0014696 (change log)

Symbol

MGI:Mir3470a

Description

Mus musculus miR-3470a stem-loop

Gene family

MIPF0000901; mir-3470

Literature search

4 open access papers mention mmu-mir-3470a
(10 sentences)

Stem-loop

   --  ug -     cuuu     -c       gc   aaa 
5'   cc  g acuca    guaga  caggcug  cuu   u
     ||  | |||||    |||||  |||||||  |||   u
3'   gg  c ugagu    cgucu  guccgac  gag   c
   ua  gu g     ccuc     cc       ua   aca 

Deep sequencing

216372 reads, 715 reads per million, 141 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCm38; GCA_000001635.2): chr6: 83090311-83090387 [-]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:Mir3470a
• MGI:Mir3470a
• RNAcentral:URS000075B9C8_10090
• miRBase Tracker:MI0014696

Mature sequence mmu-miR-3470a

• Accession: MIMAT0015640
• Sequence: 8 - ucacuuuguagaccaggcugg - 28
• Deep sequencing: 214162 reads, 120 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS0000167CC0_10090
• Predicted targets:
  • TargetScanVert:mmu-miR-3470a
  • miRDB:mmu-miR-3470a
  • microrna.org:mmu-miR-3470a

References

1. PMID:20215419 "MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing" Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A Mol Hum Reprod. 16:463-471(2010).