Stem-loop sequence ath-MIR773b

Accession

MI0014666 (change log)

Description

Arabidopsis thaliana miR773b stem-loop

Gene family

MIPF0001106; MIR773

Literature search

4 open access papers mention ath-MIR773b
(10 sentences)

Stem-loop

      u     ug        cuca  ua           g             acuau         uaa  u   -      au    u  agaaa  c 
5' ggu gaagg  gcaauaac    aa  uaucagagggu uagauacucaacg     aggaggcaa   cu gag caaaca  ugau gc     uc a
   ||| |||||  ||||||||    ||  ||||||||||| |||||||||||||     |||||||||   || ||| ||||||  |||| ||     ||  
3' ucg uuucc  cguuguug    uu  auggucucuca aucugugaguugu     uccucuguu   ga cuu guuugu  acug cg     ag u
      c     gu        auac  gc           a             -ccau         uuc  c   a      cc    u  aaauc  c 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (TAIR10; GCA_000001735.1): chr1: 13050667-13050864 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0014666

Mature sequence ath-miR773b-5p

• Accession: MIMAT0017735
• Previous IDs: ath-miR773b*
• Sequence: 62 - ggcaauaacuugagcaaaca - 81
• Evidence: experimental; Illumina [1]

Mature sequence ath-miR773b-3p

• Accession: MIMAT0017736
• Previous IDs: ath-miR773b
• Sequence: 120 - uuugauuccagcuuuugucuc - 140
• Evidence: experimental; Illumina [1]

References

1. PMID:20407027 "MicroRNA gene evolution in Arabidopsis lyrata and Arabidopsis thaliana" Fahlgren N, Jogdeo S, Kasschau KD, Sullivan CM, Chapman EJ, Laubinger S, Smith LM, Dasenko M, Givan SA, Weigel D, Carrington JC Plant Cell. 22:1074-1089(2010).