Accession
MI0014620
Description
Arabidopsis lyrata
aly-MIR847 precursor miRNA
Gene family
MIPF0001171;
MIR847
Sequence
2
reads,
70
reads per million, 1 experiments
gaauaaaagucucacaUCUUGAUGAAGAGGAAUGGAAagccgagacccaaaucaaaacagaggcgucccccaauuaaaauugguaagugauaucuaugucuugguuucgaucuugaucucggucuuUCACUCCUCUUCUUCAUGAUGuaagaauuuguuauuc
((((((...(((.(((((.(((.((((((((.(((((.(((((((..((((((.((((.(((((((...(((((....)))))............))))))).)))).))).))).))))))).))))).)))))))).))).))))).))).....))))))
((((((...(((.(((((.(((.((((((((.(((((.(((((((..((((((.((((.(((((((...(((((....)))))............))))))).)))).))).))).))))))).))))).)))))))).))).))))).))).....))))))
Structure
--aag c U U A a cc - a a ---------ccc u
gaauaa ucu acaUC UGA GAAGAGGA UGGAA gccgaga caa auc aaac gaggcgu ccaau a
|||||| ||| ||||| ||| |||||||| ||||| ||||||| ||| ||| |||| ||||||| |||||
cuuauu aga uGUAG ACU CUUCUCCU ACUuu uggcucu guu uag uuug uucugua gguua a
guuua a U U C c -a c c g ucuauagugaau a
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
GL348713.1: 2579000-2579162 [+]
Database links
Mature aly-miR847-5p
| Accession | MIMAT0017637 |
| Description | Arabidopsis lyrata aly-miR847-5p mature miRNA |
| Sequence | 17 - UCUUGAUGAAGAGGAAUGGAA - 37 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
Mature aly-miR847-3p
| Accession | MIMAT0017638 |
| Description | Arabidopsis lyrata aly-miR847-3p mature miRNA |
| Sequence | 127 - UCACUCCUCUUCUUCAUGAUG - 147 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
References
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