Accession
MI0014597
Description
Arabidopsis lyrata
aly-MIR472 precursor miRNA
Gene family
MIPF0000403;
MIR482
Sequence
22
reads,
767
reads per million, 1 experiments
ccaagggggagucauauucucaucaaagauggauucgggguuacgccucuguauguAUGGUCGAAGUAGGCAAAAUCucaccuuucuagcagaucaacaauagaugcuugauuuauaaagguugugguguuugaaaguguugagauccgcaagauuugaguaagaUUUUUCCUACUCCGCCCAUACCaugcauacaccuaauccugaguccaucucugauggguuacuauugg
((((.((...........(((((((.(((((((((((((((((.(....((((((((((((((.((((((.(((((((.(((..(((.((.((((((((.((((((((.(((((....)))))..))))))))....))))))..)).)).)))...).)).))))))).)))))).)).....))))))))))))).))))))))))))))))).)))))))...)).))))
((((.((...........(((((((.(((((((((((((((((.(....((((((((((((((.((((((.(((((((.(((..(((.((.((((((((.((((((((.(((((....)))))..))))))))....))))))..)).)).)))...).)).))))))).)))))).)).....))))))))))))).))))))))))))))))).)))))))...)).))))
Structure
g ggagucauauu a c ccuc ----- A C c - -uu a a -- ---a -u a
ccaa gg cucauca agauggauucgggguua g uguauguAUGGU CG AGUAGG AAAAUCu ac c ucu gc ga ucaaca uagaugcu gauuu u
|||| || ||||||| ||||||||||||||||| | |||||||||||| || |||||| ||||||| || | ||| || || |||||| |||||||| |||||
gguu uc ggguagu ucuaccugaguccuaau c acauacguaCCA GC UCAUCC UUUUaga ug g aga cg cu aguugu guuugugg uugga a
a --------auu c c ---- UACCC C U a a uuu a c ag gaaa ug a
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
GL348713.1: 4993634-4993866 [-]
Database links
Mature aly-miR472-5p
| Accession | MIMAT0017589 |
| Description | Arabidopsis lyrata aly-miR472-5p mature miRNA |
| Sequence | 57 - AUGGUCGAAGUAGGCAAAAUC - 77 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
Mature aly-miR472-3p
| Accession | MIMAT0017590 |
| Description | Arabidopsis lyrata aly-miR472-3p mature miRNA |
| Sequence | 166 - UUUUUCCUACUCCGCCCAUACC - 187 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
References
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