Accession
MI0014566
Description
Arabidopsis lyrata
aly-MIR172d precursor miRNA
Gene family
MIPF0000035;
MIR172
Sequence
31
reads,
1081
reads per million, 1 experiments
gauucagaauuugaaguuaguggcagucauuguuugcuauuGCAACAUCUUCAAGAUUCAGAaaucagauucuuuuauggguuuucuuuugagccuauauuauuugguuugAGAAUCUUGAUGAUGCUGCAGcggcaauuaaauggcuuauuuaucuaggguu
..((((.....)))).(((((((.(((((((..(((((.(((((.((((.(((((((((..(((((((((.....(((((((((......)))))))))..)))))))))..))))))))).)))).))))).)))))...)))))))...))).))))....
..((((.....)))).(((((((.(((((((..(((((.(((((.((((.(((((((((..(((((((((.....(((((((((......)))))))))..)))))))))..))))))))).)))).))))).)))))...)))))))...))).))))....
Structure
gauucagaauuugaag - --c -gu a A U AG ucuuu uc
uuag ugg agucauu uugcu uuGCA CAUC UCAAGAUUC Aaaucagau uauggguuu u
|||| ||| ||||||| ||||| ||||| |||| ||||||||| ||||||||| |||||||||
gauc auu ucgguaa aacgg GACGU GUAG AGUUCUAAG uuugguuua auauccgag u
------------uugg u uau auu c C U Ag ---uu uu
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
GL348717.1: 17548801-17548963 [+]
Database links
Mature aly-miR172d-5p
| Accession | MIMAT0017527 |
| Description | Arabidopsis lyrata aly-miR172d-5p mature miRNA |
| Sequence | 42 - GCAACAUCUUCAAGAUUCAGA - 62 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
Mature aly-miR172d-3p
| Accession | MIMAT0017528 |
| Description | Arabidopsis lyrata aly-miR172d-3p mature miRNA |
| Sequence | 112 - AGAAUCUUGAUGAUGCUGCAG - 132 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
| Database links |
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References
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