Accession
MI0014549
Description
Arabidopsis lyrata
aly-MIR169e precursor miRNA
Gene family
MIPF0000037;
MIR169_2
Sequence
32
reads,
1116
reads per million, 1 experiments
gucacuaauuguaucauagagucuugcauggaaaaaauagagaaugagauUGAGCCAAGGAUGACUUGCCGaauuuauuaacaaaucucaaaugauuauggugcccgGCAAGUUGACCUUGGCUCUGUuuccuucucuucuuuucgaugucaaacucuagauauaucaaucgau
(((......((((((.((((((.((((((.(((((...((((((.(((((.(((((((((..(((((((((....(((((...((((......)))).)))))..)))))))))..))))))))).))))).))))))..))))).))).)))))))))))))))......)))
(((......((((((.((((((.((((((.(((((...((((((.(((((.(((((((((..(((((((((....(((((...((((......)))).)))))..)))))))))..))))))))).))))).))))))..))))).))).)))))))))))))))......)))
Structure
acuaau a c - g aau u U AU aauu aca uc guc uguauc uagagu uug cau gaaaa agagaa gagau GAGCCAAGG GACUUGCCG uauua aauc a ||| |||||| |||||| ||| ||| ||||| |||||| ||||| ||||||||| ||||||||| ||||| |||| uag auauag aucuca aac gua cuuuu ucucuu cuuUG CUCGGUUCC UUGAACGgc guggu uuag a cuaacu - - u g -cu c U AG --cc --a ua
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
GL348713.1: 28728962-28729135 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from aly-MIR169e
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature aly-miR169e-5p
| Accession | MIMAT0017493 |
| Description | Arabidopsis lyrata aly-miR169e-5p mature miRNA |
| Sequence | 51 - UGAGCCAAGGAUGACUUGCCG - 71 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
| Database links |
|
Mature aly-miR169e-3p
| Accession | MIMAT0017494 |
| Description | Arabidopsis lyrata aly-miR169e-3p mature miRNA |
| Sequence | 108 - GCAAGUUGACCUUGGCUCUGU - 128 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
| Database links |
|
References
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