Accession
MI0014524
Description
Arabidopsis lyrata
aly-MIR161 precursor miRNA
Gene family
MIPF0000455;
MIR161
Sequence
277
reads,
9658
reads per million, 1 experiments
gaUCAAUGCAUUGAAAGUGACUACAUCGGGGuuuuguuuuuuuguugcucccacgaucgaaucgauaugaggaagaugaaaaauuaaucaaccCCGGUUUAGUCACUUUCACUGCAUUAAUC
(((.((((((.((((((((((((.((((((((((((.(((((((((..(((((..((((...)))).)).))).))))))))).)))..))))))))).)))))))))))).)))))).)))
(((.((((((.((((((((((((.((((((((((((.(((((((((..(((((..((((...)))).)).))).))))))))).)))..))))))))).)))))))))))).)))))).)))
Structure
C U C -- u gc - cg a gaU AAUGCA UGAAAGUGACUA AUCGGGGuu uug uuuuuuguu ucc ca aucg ||| |||||| |||||||||||| ||||||||| ||| ||||||||| ||| || |||| a CUA UUACGU ACUUUCACUGAU UGGCCccaa aau aaaaaguag agg gu uagc A C U cu u -a a -a u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
GL348713.1: 24491110-24491231 [+]
Database links
Mature aly-miR161-5p.2
| Accession | MIMAT0017441 |
| Description | Arabidopsis lyrata aly-miR161-5p.2 mature miRNA |
| Sequence | 3 - UCAAUGCAUUGAAAGUGACUA - 23 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
| Database links |
|
Mature aly-miR161-5p.1
| Accession | MIMAT0017442 |
| Description | Arabidopsis lyrata aly-miR161-5p.1 mature miRNA |
| Sequence | 11 - UUGAAAGUGACUACAUCGGGG - 31 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
| Database links |
|
Mature aly-miR161-3p.1
| Accession | MIMAT0017443 |
| Description | Arabidopsis lyrata aly-miR161-3p.1 mature miRNA |
| Sequence | 94 - CCGGUUUAGUCACUUUCAC - 112 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
Mature aly-miR161-3p.2
| Accession | MIMAT0017444 |
| Description | Arabidopsis lyrata aly-miR161-3p.2 mature miRNA |
| Sequence | 102 - GUCACUUUCACUGCAUUAAUC - 122 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
References
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