Accession
MI0014515
Description
Arabidopsis lyrata
aly-MIR159a precursor miRNA
Gene family
MIPF0000010;
MIR159
Sequence
4480
reads,
156102
reads per million, 1 experiments
gagaaaaaaaaagauggaaguaGAGCUCCUUGAAGUUCAAACGagaguugagcaggguaaagaaaagcugcuaagcuauggaucccauaagcccuaauccuuauaaagaaaaaaaaggauuugguuauauggcuugcauaucucaggagcuuuaacuugcccuuuaauggcuuuuacucuucUUUGGAUUGAAGGGAGCUCUAcaucuucuuucaccuucuc
(((((....(((((.(((.((((((((((((..((((((((.((((((.(((((((((((...((((((.((.((.((((.(..(((((((((..(((((((............))))))).)))).)))))..).)))).)).)).))))))...)))))))......))))..)))))).))))))))..)))))))))))).))))))))....)))))
(((((....(((((.(((.((((((((((((..((((((((.((((((.(((((((((((...((((((.((.((.((((.(..(((((((((..(((((((............))))))).)))).)))))..).)))).)).)).))))))...)))))))......))))..)))))).))))))))..)))))))))))).))))))))....)))))
Structure
aaaa u a GA C -u ------ aga g a c g uc - cu auaaa
gagaa aaaga gga guaGAGCUCCUU AGUUCAAA Gagagu gagc aggguaa aaagcu cu ag uaug a ccaua agcc aauccuu g
||||| ||||| ||| |||||||||||| |||||||| |||||| |||| ||||||| |||||| || || |||| | ||||| |||| |||||||
cucuu uuucu ucu cAUCUCGAGGGA UUAGGUUU uucuca uucg ucccguu uuucga ga uc auac u gguau uugg uuaggaa a
ccac - a AG c uu guaauu caa g c u g uc a -u aaaaa
Annotation confidence
High
Do you think this miRNA is real?
Genome context
GL348714.1: 15958623-15958844 [-]
Database links
Mature aly-miR159a-5p
| Accession | MIMAT0017423 |
| Description | Arabidopsis lyrata aly-miR159a-5p mature miRNA |
| Sequence | 23 - GAGCUCCUUGAAGUUCAAACG - 43 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
Mature aly-miR159a-3p
| Accession | MIMAT0017424 |
| Description | Arabidopsis lyrata aly-miR159a-3p mature miRNA |
| Sequence | 183 - UUUGGAUUGAAGGGAGCUCUA - 203 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
| Database links |
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References
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