miRBase entry: bmo-mir-3417

Stem-loop bmo-mir-3417


Accession
MI0014481
Description
Bombyx mori bmo-mir-3417 precursor miRNA


Sequence

guaaaggaaucguuacguuuuguuugucgcuaaaugaguacguuuuaugaucuauaucuuacuggauggauguuggccgugaauuauauucagcugcagUAGAGAUAUUCGAUAAUGUUUUGuuuuuacg
(((((((.......((((((((..((((.(((..((((((...((((((.((.((((((........)))))).)).))))))...)))))).......))).))))..))).)))))....))))))).

Structure
-       aaucguu     -   uu    g   -----aa      cgu      a  u      uac 
 guaaagg       acguu uug  uguc cua       ugagua   uuuaug uc auaucu   u
 |||||||       ||||| |||  |||| |||       ||||||   |||||| || ||||||    
 cauuuuu       UGUAA AGC  AUAG GAU       acuuau   aagugc gg uguagg   g
g       ---GUUU     U   UU    A   gacgucg      auu      c  u      uag 


Annotation confidence Not enough data
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Genome context
NW_004582015.1: 2052671-2052800 [-]

Database links

Mature bmo-miR-3417

Accession MIMAT0015624
Description Bombyx mori bmo-miR-3417 mature miRNA
Sequence 100 - UAGAGAUAUUCGAUAAUGUUUUG - 122
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415