miRBase entry: bmo-mir-3397

Stem-loop bmo-mir-3397


Accession
MI0014460
Description
Bombyx mori bmo-mir-3397 precursor miRNA


Sequence

ggaucuucuaccccgcaguUAGGCUGAAUAUCUCGGUAGAAUcagucagaaugcaauuguuugaaaguuggaugaugugauauauugugauauuuguacaagcaaacuca
................((((..((((((((((.(((((..((((..((..((.(((((.......))))).))..)))))).))))).))))))).....))).))))..

Structure
ggaucuucuaccccgc    AG   -----       U     GA    gu  ga  g     gu 
                aguU  GCU     GAAUAUC CGGUA  AUca  ca  au caauu  u
                ||||  |||     ||||||| |||||  ||||  ||  || |||||  u
                ucaa  cga     uuuauag guuau  uagu  gu  ua guuga  g
--------------ac    -a   acaug       u     -a    --  ag  g     aa 


Annotation confidence Not enough data
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Genome context
NW_004581685.1: 3631919-3632028 [+]

Database links

Mature bmo-miR-3397

Accession MIMAT0015601
Description Bombyx mori bmo-miR-3397 mature miRNA
Sequence 20 - UAGGCUGAAUAUCUCGGUAGAAU - 42
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415