miRBase entry: bmo-mir-3342

Stem-loop bmo-mir-3342


Accession
MI0014400
Description
Bombyx mori bmo-mir-3342 precursor miRNA


Sequence

2 reads, 0 reads per million, 1 experiments
aucagauuuggcgguggcucuugccacUGACCAUGGUGACGAGUCGAGCCCcccgaaacgccucacaaugagguccgggauggucgcucgcaccgaugggaucgcuaagccgccguccugaa
.((((....((((((((((...((......((((((((.((((.(((.(..((((....((((((...)))))).))))..).))))))))))).))))....))..)))))))))))))).

Structure
a    auuu          cuu  cacUGA    -    A    U   G CC    aaac      c 
 ucag    ggcgguggcu   gc      CCAU GGUG CGAG CGA C  cccg    gccuca  
 ||||    ||||||||||   ||      |||| |||| |||| ||| |  ||||    |||||| a
 aguc    cugccgccga   cg      ggua ccac gcuc gcu g  gggc    uggagu  
a    ----          -au  --cuag    g    -    -   g ua    ---c      a 


Annotation confidence Not enough data
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Genome context
NW_004618747.1: 528-649 [+]

Database links

Mature bmo-miR-3342

Accession MIMAT0015529
Description Bombyx mori bmo-miR-3342 mature miRNA
Sequence 28 - UGACCAUGGUGACGAGUCGAGCCC - 51
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415