Stem-loop sequence bmo-mir-3327

AccessionMI0014385 (change log)
DescriptionBombyx mori miR-3327 stem-loop
Gene family MIPF0001547; mir-3327
Literature search

1 open access papers mention bmo-mir-3327
(1 sentences)

Stem-loop 
   ---a  acauuuu       guauaa                   c  uauac 
5'     ga       ggguaau      acaacaggaauguuaugua ag     a
       ||       |||||||      ||||||||||||||||||| ||     g
3'     cu       cucauua      uguuguuuuugcaauguau uc     a
   ucaa  ccaucau       -aaucc                   a  uuaau
Get sequence
Deep sequencing
2 reads, 0 reads per million, 2 experiments
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (ASM15162v1; GCA_000151625.1) Overlapping transcripts
NW_004582013.1: 6563612-6563716 [-]
intergenic
Clustered miRNAs
< 10kb from bmo-mir-3327
bmo-mir-3338NW_004582013.1: 6563758-6563864 [-]
bmo-mir-3327NW_004582013.1: 6563612-6563716 [-]
Database links

Mature sequence bmo-miR-3327-5p

Accession MIMAT0015514
Previous IDsbmo-miR-3327
Sequence

23 -  

aacaacaggaauguuauguac

 - 43

Get sequence
Deep sequencing1 reads, 1 experiments
Evidence experimental; SOLID [1]

Mature sequence bmo-miR-3327-3p

Accession MIMAT0015515
Previous IDsbmo-miR-3327*
Sequence

61 -  

auauguaacguuuuuguuguccu

 - 83

Get sequence
Evidence experimental; SOLID [1]

References

1
PMID:20229201 "Novel microRNAs in silkworm (Bombyx mori)" Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J Funct Integr Genomics. 10:405-415(2010).