miRBase entry: bmo-mir-3318

Stem-loop bmo-mir-3318


Accession
MI0014376
Description
Bombyx mori bmo-mir-3318 precursor miRNA

Literature search
1 open access papers mention bmo-mir-3318
(1 sentences)

Sequence

44 reads, 0 reads per million, 3 experiments
augaccuaucGGAUUUUACAUUUUUGCAUGUUGCgcuuaaaaaauuagacacagacacugcccgugcguuugaauccuaucagcgcuuaaauaauaagggaugcgaaauaccauuguuuguagaucuagugucu
..((.(((.(((((.......((((((((.(((((((.......((((((.((...........)).))))))........)))))...........)).)))))))).......)))))))).))........

Structure
------au  c   u     UUUACAU        G  -----------     -uaaaaaa      a  gaca 
        ga cua cGGAU       UUUUGCAU UU           GCgcu        uuagac ca    c
        || ||| |||||       |||||||| ||           |||||        |||||| ||    u
        cu gau guuug       aaagcgua gg           cgcga        aguuug gu    g
ucugugau  a   -     uuaccau        g  aauaauaaauu     cuauccua      c  gccc 


Annotation confidence Not enough data
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Genome context
NW_004581690.1: 338052-338185 [+]

Database links

Mature bmo-miR-3318

Accession MIMAT0015506
Description Bombyx mori bmo-miR-3318 mature miRNA
Sequence 11 - GGAUUUUACAUUUUUGCAUGUUGC - 34
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415