miRBase entry: bmo-mir-3314

Stem-loop bmo-mir-3314


Accession
MI0014372
Description
Bombyx mori bmo-mir-3314 precursor miRNA

Literature search
1 open access papers mention bmo-mir-3314
(1 sentences)

Sequence

reads, None reads per million, experiments
gggcauggcggcaucgcaaauguuugccauggugccccggaaccagccgaccuccgcauccacguccgcgagccgcgcggguuuuggcgcccACGCAGCAACAGCGGCCGCCUCCa
(((...((((((..(((...((((.((..(((.((.((((((((.((((..(((.((..........))))).)).)).)))))))).))))).))))))...)))))))))))).

Structure
-   cau      au   aaa    u  ca   u  c        a  -  ac   c  aucc 
 ggg   ggcggc  cgc   uguu gc  ugg gc ccggaacc gc cg  cuc gc    a
 |||   ||||||  |||   |||| ||  ||| || |||||||| || ||  ||| ||     
 CCU   CCGCCG  GCG   ACGA CG  Acc cg gguuuugg cg gc  gag cg    c
a   ---      --   ACA    -  -C   -  c        g  c  -c   -  ccug 


Annotation confidence Not enough data
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Genome context
NW_004601752.1: 140-255 [+]

Database links

Mature bmo-miR-3314

Accession MIMAT0015502
Description Bombyx mori bmo-miR-3314 mature miRNA
Sequence 93 - ACGCAGCAACAGCGGCCGCCUCC - 115
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415