miRBase entry: bmo-mir-3297

Stem-loop bmo-mir-3297


Accession
MI0014354
Description
Bombyx mori bmo-mir-3297 precursor miRNA


Sequence

uuaguuauaacgacaauugccuaGCACAUCUAGUCAAAAAUAUUGGAGgcaaaccaucuggaccugggccuuuauuuaagucuaguuuuuuUAACUUAUGCAAUAUUUCUGACUCAgguaugaucagaguguuuaacg
...((((.(((.((..(((.....((.(((((((((.(((((((((((..(((....((((((.((((......)))).))))))....)))..)))...)))))))).))))).)))).))..))).))))))))).

Structure
uua    u   g  aa   ccuaG  C    -     A        ---   gc   ccau      c    cc 
   guua aac ac  uug     CA AUCU AGUCA AAAUAUUG   GAG  aaa    cuggac uggg  u
   |||| ||| ||  |||     || |||| ||||| ||||||||   |||  |||    |||||| ||||   
   caau uug ug  gac     gu uggA UCAGU UUUAUAAC   UUC  Uuu    gaucug auuu  u
--g    -   -  -a   ---ua  a    C     C        GUA   AA   uuuu      a    au 


Annotation confidence Not enough data
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Genome context
NW_004582057.1: 11225-11362 [+]

Database links

Mature bmo-miR-3297-5p

Accession MIMAT0015485
Description Bombyx mori bmo-miR-3297-5p mature miRNA
Sequence 24 - GCACAUCUAGUCAAAAAUAUUGGAG - 48
Evidence experimental
SOLID [1]

Mature bmo-miR-3297-3p

Accession MIMAT0015486
Description Bombyx mori bmo-miR-3297-3p mature miRNA
Sequence 92 - UAACUUAUGCAAUAUUUCUGACUCA - 116
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415