miRBase entry: bmo-mir-3294

Stem-loop bmo-mir-3294


Accession
MI0014351
Description
Bombyx mori bmo-mir-3294 precursor miRNA


Sequence

115 reads, 23 reads per million, 3 experiments
aaucuuuugacauauaucgcguguucacgguagguauuggcucguggcacuauguaguACCACAGACAGUAUCUAACCUGAacacagauauuucaucgugaa
..((...(((...(((((..(((((((.(((((((((((.((.((((.(((....))).)))))).)))))))).)))))))))).))))).)))....)).

Structure
aa  -uuu   cau     gc       c   -        g  c    c   a 
  uc    uga   auauc  guguuca ggu agguauug cu gugg acu u
  ||    |||   |||||  ||||||| ||| |||||||| || |||| |||  
  ag    acu   uauag  cacaAGU CCA UCUAUGAC GA CACC uga g
-a  ugcu   --u     -a       -   A        A  -    A   u 


Annotation confidence Not enough data
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Genome context
NW_004582382.1: 365-466 [-]

Database links

Mature bmo-miR-3294

Accession MIMAT0015481
Description Bombyx mori bmo-miR-3294 mature miRNA
Sequence 59 - ACCACAGACAGUAUCUAACCUGA - 81
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415