miRBase entry: bmo-mir-3275

Stem-loop bmo-mir-3275


Accession
MI0014331
Description
Bombyx mori bmo-mir-3275 precursor miRNA


Sequence

22 reads, 12 reads per million, 3 experiments
cgaauuagugauuauacaauuaagucggugaauuaucaaguuccuuaucuuaggacuuacaguacgaggagcaucucgaaguuggagcacgaagaacugggagacgggaugaugaugauuUGAUUCUUGAGUAGGACUUCCUUCa
.(((..(((..((((.(((((((((((....((((((..((((((..((((.(..(((......((((......))))......)))..).))))...)))).))..))))))..)))))))))...)).)))).)))...))).

Structure
c   -uu   ga    a  ---         guga      aa  -    -ua    a ga   acagua    ga 
 gaa   agu  uuau ca   auuaagucg    auuauc  gu uccu   ucuu g  cuu      cgag  g
 |||   |||  |||| ||   |||||||||    ||||||  || ||||   |||| |  |||      ||||   
 CUU   UCA  GAUG GU   UAGUuuagu    uaguag  ca aggg   agaa c  gag      gcuc  c
a   CCU   -G    A  UCU         --ag      gg  g    uca    g ac   guugaa    ua 


Annotation confidence Not enough data
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Genome context
NW_004581705.1: 827930-828074 [+]

Database links

Mature bmo-miR-3275

Accession MIMAT0015460
Description Bombyx mori bmo-miR-3275 mature miRNA
Sequence 121 - UGAUUCUUGAGUAGGACUUCCUUC - 144
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415