miRBase entry: bmo-mir-3256

Stem-loop bmo-mir-3256


Accession
MI0014312
Description
Bombyx mori bmo-mir-3256 precursor miRNA


Sequence

ugaaggaUGGCUCUGAUUUCCGCUUGUAaugguaucuacagaaaauccuuacgcuauggagcucagcucagcaucaagacaauuuuuuuuuccggagcgccccuuaacaagugguagacaaccaaucuagugcgaacauucug
...((((((((.((((((.((((((((...(((.(((...(((((........((.(((.(((......))).))))).........))))).)))..))).....)))))))).........)))).)).))...)))))).

Structure
uga      ---  U  -    --------U        --Aau   -a   aca     -uccuuacg  a   a   ca 
   aggaUG   GC CU GAUU         CCGCUUGU     ggu  ucu   gaaaa         cu ugg gcu  g
   ||||||   || || ||||         ||||||||     |||  |||   |||||         || ||| |||   
   ucuuac   cg ga cuaa         ggugaaca     ccg  agg   cuuuu         ga acu cga  c
--g      aag  u  u    ccaacagau        auucc   cg   --c     uuuuuaaca  -   a   cu 


Annotation confidence Not enough data
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Genome context
NW_004582019.1: 1283544-1283686 [-]

Database links

Mature bmo-miR-3256

Accession MIMAT0015439
Description Bombyx mori bmo-miR-3256 mature miRNA
Sequence 8 - UGGCUCUGAUUUCCGCUUGUA - 28
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415