Stem-loop bmo-mir-2807d

Accession

MI0014306

Description

Bombyx mori bmo-mir-2807d precursor miRNA

Gene family

MIPF0000826; mir-2807

Sequence

111 reads, 28 reads per million, 3 experiments

agugcgaguuauuuaacauuuucgauagcguaaaaguuaguucauauuuguauggaaugggaccguuugccgcuagaggcgcuguucCAGCUGCAUACAAAAUUGGGCuaauuuuuacgcuaucgagaacguuaaaaaacucgcacuaa
((((((((((.((((((.((((((((((((((((((((((((((..((((((((.(.((((((.((..(((......))))).))))))..).))))))))..)))))))))))))))))))))))))).)))))).))))))))))..

Structure

--          a      a                          ua        g -a      c  uu   gc 
  agugcgaguu uuuaac uuuucgauagcguaaaaguuaguuca  uuuguaug a  ugggac gu  gcc  u
  |||||||||| |||||| ||||||||||||||||||||||||||  |||||||| |  |||||| ||  |||   
  ucacgcucaa aaauug aagagcuaucgcauuuuuaauCGGGU  AAACAUAC U  ACcuug cg  cgg  a
aa          a      c                          UA        G CG      u  --   ag 

Annotation confidence Not enough data

Genome context

NW_004582034.1: 4583916-4584064 [+]

Mature bmo-miR-2807d

• Accession: MIMAT0015433
• Description: Bombyx mori bmo-miR-2807d mature miRNA
• Sequence: 88 - CAGCUGCAUACAAAAUUGGGC - 108
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415