miRBase entry: bmo-mir-3246

Stem-loop bmo-mir-3246


Accession
MI0014301
Description
Bombyx mori bmo-mir-3246 precursor miRNA


Sequence

17 reads, 4 reads per million, 2 experiments
cuuguuuuaacuugauauuUUGCUAUCAGAACAUUGUGUCAUucucgacaaguacucgucuuuuacuugcgcgucagcaagugcaucgaagucgaguaccgucgggcacauaauuguuucuaugcgggauaaugugucggcuaca
...(((...((....((((((((.((..(((((((((((....((((((..(((((((.(((((((((((......)))))))....)))).))))))).)))))).)))))).)))))..))))))))))..))...)))....

Structure
-cuu   uua  uuga        U  CA     -      CAUu      aa       u    ----       gc 
    guu   ac    uauuUUGC AU  GAACA UUGUGU    cucgac  guacucg cuuu    uacuugc  g
    |||   ||    |||||||| ||  ||||| ||||||    ||||||  ||||||| ||||    |||||||   
    cgg   ug    auagggcg ua  uuugu aauaca    gggcug  caugagc gaag    gugaacg  u
acau   cug  --ua        -  uc     u      ---c      -c       u    cuac       ac 


Annotation confidence Not enough data
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Genome context
NW_004581689.1: 1861443-1861587 [-]

Database links

Mature bmo-miR-3246

Accession MIMAT0015428
Description Bombyx mori bmo-miR-3246 mature miRNA
Sequence 20 - UUGCUAUCAGAACAUUGUGUCAU - 42
Evidence experimental
SOLID [1]
Database links

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415