miRBase entry: bmo-mir-3233

Stem-loop bmo-mir-3233


Accession
MI0014287
Description
Bombyx mori bmo-mir-3233 precursor miRNA


Sequence

aaugugccuuuugguUCUUCGUGUUCCAUUACUCUUACuauucuuauaauauaaucuuuuauaguuuaaauguuaaggguuucugaaacugaauuauaugaucagggcacgg
...((((((..(((((.((((.(((.((..(((((((.((((..((...(((((....)))))...)))))).)))))))...)).)))))))......)))))))))))..

Structure
aau      uu     -----C    U   C  -UU       C    cu  uaa     u 
   gugccu  ugguU      UUCG GUU CA   ACUCUUA uauu  ua   uauaa c
   ||||||  |||||      |||| ||| ||   ||||||| ||||  ||   |||||  
   cacggg  acuag      aagu caa gu   ugggaau guaa  au   auauu u
-gg      --     uauauu    -   a  cuu       u    --  uug     u 


Annotation confidence Not enough data
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Genome context
NW_004581764.1: 277109-277220 [+]

Database links

Mature bmo-miR-3233

Accession MIMAT0015415
Description Bombyx mori bmo-miR-3233 mature miRNA
Sequence 16 - UCUUCGUGUUCCAUUACUCUUAC - 38
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415