Stem-loop bmo-mir-3211

Accession

MI0014264

Description

Bombyx mori bmo-mir-3211 precursor miRNA

Sequence

reads, None reads per million, experiments

aacauacggcugaguccgcgugcggcagucgacugacucguuuuuuaggcuacguguucgauauuuuuucuucguuucgucgccagccaguuguccgacUCCUUGGUCACCGGUCAGUCCGGuauguc
.((((((((((((..(((.((((((.(((((((.((((.(((.....(((.(((....(((..........)))...))).)))))).)))))).)))))))...).)))))))))).)).)))))).

Structure

a      -  -    gu   c   - ---  c     -  u    c   uuuua   u   uguu   uauu 
 acauac gg cuga  ccg gug c   gg agucg ac gacu guu     ggc acg    cga    u
 |||||| || ||||  ||| ||| |   || ||||| || |||| |||     ||| |||    |||     
 uguauG CC GACU  GGC CAC G   CC Ucagc ug uuga cga     ccg ugc    gcu    u
c      G  U    --   -   U GUU  -     c  -    c   -----   c   -uuu   ucuu 

Annotation confidence Not enough data

Genome context

NW_004581824.1: 88924-89051 [+]

Mature bmo-miR-3211

• Accession: MIMAT0015390
• Description: Bombyx mori bmo-miR-3211 mature miRNA
• Sequence: 100 - UCCUUGGUCACCGGUCAGUCCGG - 122
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415