miRBase entry: bmo-mir-3209

Stem-loop bmo-mir-3209


Accession
MI0014262
Description
Bombyx mori bmo-mir-3209 precursor miRNA


Sequence

agcaacauguagcucaguguucagcgaauucuuuuggacuauuuaaucgggccucuuagucuucuuccaugaggcuuuucaaaaaccaucagcuauuCGAGGCGACGUGAGUCUAUUCCGCc
.((.....((((((((.(((((..(((((.((..(((...........(((((((...............)))))))........)))..))..)))))..).)))))))).))))...)).

Structure
a  aacau    -    g    - ag     -u  uu   acuauuuaauc       uuaguc 
 gc     guag cuca uguu c  cgaau  cu  ugg           gggccuc      u
 ||     |||| |||| |||| |  |||||  ||  |||           |||||||      u
 CG     UAUC GAGU GCAG G  GCuua  ga  acc           uucggag      c
c  --CCU    U    -    C GA     uc  cu   ---aaaaacuu       uaccuu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
NW_004582028.1: 4137723-4137844 [+]

Database links

Mature bmo-miR-3209

Accession MIMAT0015388
Description Bombyx mori bmo-miR-3209 mature miRNA
Sequence 98 - CGAGGCGACGUGAGUCUAUUCCGC - 121
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415