miRBase entry: hsa-mir-3177

Stem-loop hsa-mir-3177


Accession
MI0014211
Symbol
HGNC: MIR3177
Description
Homo sapiens hsa-mir-3177 precursor miRNA

Literature search
2 open access papers mention hsa-mir-3177
(2 sentences)

Sequence

487 reads, 34 reads per million, 45 experiments
ccacgugccaUGUGUACACACGUGCCAGGCGCUgucuugagacauucgcgcagUGCACGGCACUGGGGACACGUggcacugg
(((.(((((((((((...((.(((((..(((((((..(((.....))).)))))))..)))))))...))))))))))))))

Structure
   c           ACA  C     AG       cu   g 
cca gugccaUGUGU   CA GUGCC  GCGCUgu  uga a
||| |||||||||||   || |||||  |||||||  ||| c
ggu cacggUGCACA   GU CACGG  CGUgacg  gcu a
   -           GGG  -     CA       -c   u 


Annotation confidence High
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Genome context
chr16: 1734985-1735066 [+]

Disease association
hsa-mir-3177 is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-3177-3p

Accession MIMAT0015054
Description Homo sapiens hsa-miR-3177-3p mature miRNA
Sequence 54 - UGCACGGCACUGGGGACACGU - 74
Evidence experimental
Illumina [1-3]
Database links
Predicted targets

Mature hsa-miR-3177-5p

Accession MIMAT0019215
Description Homo sapiens hsa-miR-3177-5p mature miRNA
Sequence 11 - UGUGUACACACGUGCCAGGCGCU - 33
Evidence experimental
Illumina [2-3]

References

  1. PubMed ID: 20300190
    Characterization of the Melanoma miRNAome by Deep Sequencing
    "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
    "PLoS One (2010) 5:e9685

  2. PubMed ID: 21199797
    Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene
    "Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C"
    "Cancer Res (2011) 71:78-86

  3. PubMed ID: 21606961
    Discovery of new microRNAs by small RNAome deep sequencing in childhood acute lymphoblastic leukemia
    "Schotte D, Akbari Moqadam F, Lange-Turenhout EA, Chen C, van Ijcken WF, Pieters R, den Boer ML"
    "Leukemia (2011) 25:1389-1399