Stem-loop sequence hsa-mir-3164

Accession

MI0014194 (change log)

Symbol

HGNC:MIR3164

Description

Homo sapiens miR-3164 stem-loop

Literature search

1 open access papers mention hsa-mir-3164
(1 sentences)

Stem-loop

   -  u                  g         -caca      
5'  cu ggaaacugugacuuuaag gaaauggcg     gcaga 
    || |||||||||||||||||| |||||||||     |||| c
3'  ga ccuuugacgcugaaguuc uuuugccgu     cgucc 
   g  c                  g         acuaa      

Deep sequencing

625 reads, 0 reads per million, 71 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr11: 69083176-69083258 [+]
• Overlapping transcripts:

  sense

  OTTHUMT00000396553 ; MYEOV-008; intron 1

  OTTHUMT00000396651 ; MYEOV-009; intron 1

  ENST00000544008 ; MYEOV-008; intron 1

  ENST00000544781 ; MYEOV-009; intron 1

Database links

• EntrezGene:MIR3164
• HGNC:MIR3164
• RNAcentral:URS000075E7C6_9606
• miRBase Tracker:MI0014194

Mature sequence hsa-miR-3164

• Accession: MIMAT0015038
• Sequence: 10 - ugugacuuuaagggaaauggcg - 31
• Deep sequencing: 608 reads, 67 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS000042E8CC_9606
• Predicted targets:
  • TargetMiner:hsa-miR-3164
  • TargetScanVert:hsa-miR-3164
  • miRDB:hsa-miR-3164
  • microrna.org:hsa-miR-3164

References

1. PMID:20300190 "Characterization of the Melanoma miRNAome by Deep Sequencing" Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK PLoS One. 5:e9685(2010).