miRBase entry: hsa-mir-1273c

Stem-loop hsa-mir-1273c


Accession
MI0014171
Symbol
HGNC: MIR1273C
Description
Homo sapiens hsa-mir-1273c precursor miRNA
Gene family
MIPF0001481; mir-1273c

Literature search
6 open access papers mention hsa-mir-1273c
(34 sentences)

Sequence

720 reads, 576 reads per million, 97 experiments
ugcagccugGGCGACAAAACGAGACCCUGUCuuuuuuuuuuucugagacagagucucguucuguugcccaagcugga
..((((.(((((((((.((((((((.(((((((...........))))))).)))))))).))))))))).))))..

Structure
ug    c         A        C       uuuu 
  cagc ugGGCGACA AACGAGAC CUGUCuu    u
  |||| ||||||||| |||||||| |||||||    u
  gucg acccguugu uugcucug gacagag    u
ag    a         c        a       ucuu 


Annotation confidence Not enough data
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Genome context
chr6: 154853360-154853436 [+]

Database links

Mature hsa-miR-1273c

Accession MIMAT0015017
Description Homo sapiens hsa-miR-1273c mature miRNA
Sequence 10 - GGCGACAAAACGAGACCCUGUC - 31
Evidence experimental
Illumina [1-2]
Database links
Predicted targets

References

  1. PubMed ID: 20300190
    Characterization of the Melanoma miRNAome by Deep Sequencing
    "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
    "PLoS One (2010) 5:e9685

  2. PubMed ID: 20224791
    Discovery of novel microRNAs in female reproductive tract using next generation sequencing
    Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH
    PLoS One (2010) 5:e9637