miRBase entry: hsa-mir-3129

Stem-loop hsa-mir-3129


Accession
MI0014146
Symbol
HGNC: MIR3129
Description
Homo sapiens hsa-mir-3129 precursor miRNA
Gene family
MIPF0001458; mir-3129

Literature search
1 open access papers mention hsa-mir-3129
(74 sentences)

Sequence

317 reads, 36 reads per million, 52 experiments
guacuuggGCAGUAGUGUAGAGAUUGGUUUgccuguuaaugaauucAAACUAAUCUCUACACUGCUGCccaagagc
...((((((((((((((((((((((((((((..(........)..))))))))))))))))))))))))))))...

Structure
gua                            cc guu 
   cuuggGCAGUAGUGUAGAGAUUGGUUUg  u   a
   ||||||||||||||||||||||||||||  |    
   gaaccCGUCGUCACAUCUCUAAUCAAAc  a   a
cga                            uu agu 


Annotation confidence Not enough data
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Genome context
chr2: 189133036-189133111 [-]

Database links

Mature hsa-miR-3129-5p

Accession MIMAT0014992
Description Homo sapiens hsa-miR-3129-5p mature miRNA
Sequence 9 - GCAGUAGUGUAGAGAUUGGUUU - 30
Evidence experimental
Illumina [1-3]
Database links
Predicted targets

Mature hsa-miR-3129-3p

Accession MIMAT0019202
Description Homo sapiens hsa-miR-3129-3p mature miRNA
Sequence 47 - AAACUAAUCUCUACACUGCUGC - 68
Evidence experimental
Illumina [3]
Database links
Predicted targets

References

  1. PubMed ID: 20300190
    Characterization of the Melanoma miRNAome by Deep Sequencing
    "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
    "PLoS One (2010) 5:e9685

  2. PubMed ID: 20224791
    Discovery of novel microRNAs in female reproductive tract using next generation sequencing
    Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH
    PLoS One (2010) 5:e9637

  3. PubMed ID: 21199797
    Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene
    "Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C"
    "Cancer Res (2011) 71:78-86