miRBase entry: mmu-mir-3065

Stem-loop mmu-mir-3065


Accession
MI0014027
Symbol
MGI: Mir3065
Description
Mus musculus mmu-mir-3065 precursor miRNA
Gene family
MIPF0001105; mir-3065

Literature search
2 open access papers mention mmu-mir-3065
(3 sentences)

Sequence

75283 reads, 4 reads per million, 77 experiments
gcagcugcccucuUCAACAAAAUCACUGAUGCUGGagucacugugcacccacUCAGCACCAGGAUAUUGUUGGGGaggacggccugu
(((((((.((((((((((((.(((.(((.(((((.(((............)))))))).)))))).)))))))))))).))).))))

Structure
    -   c            A   A   A     G   cacug 
gcag cug ccucuUCAACAA AUC CUG UGCUG agu     u
|||| ||| |||||||||||| ||| ||| ||||| |||      
uguc ggc ggaGGGGUUGUU UAG GAC ACGAC Uca     g
    c   a            A   -   C     -   cccac 


Annotation confidence Not enough data
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Genome context
chr11: 120014767-120014853 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mmu-mir-3065
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-3065-5p

Accession MIMAT0014836
Description Mus musculus mmu-miR-3065-5p mature miRNA
Sequence 14 - UCAACAAAAUCACUGAUGCUGG - 35
Evidence experimental
Illumina [1]
Database links
Predicted targets

Mature mmu-miR-3065-3p

Accession MIMAT0014837
Description Mus musculus mmu-miR-3065-3p mature miRNA
Sequence 53 - UCAGCACCAGGAUAUUGUUGGGG - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20413612
    Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
    "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
    "Genes Dev (2010) 24:992-1009