miRBase entry: api-mir-3045b

Stem-loop api-mir-3045b


Accession
MI0014016
Description
Acyrthosiphon pisum api-mir-3045b precursor miRNA
Gene family
MIPF0001120; mir-3045


Sequence

cagaauaaaagcagaccagauuuauguagcaaauccaguuuugaccguggccGCCUGGUGUGCUCUUAUUCUGAA
((((((((.((((.(((((..(((((...((((......))))..)))))....))))).)))).))))))))..

Structure
--        a    g     --au     uag    uc 
  cagaauaa agca accag    uuaug   caaa  c
  |||||||| |||| |||||    |||||   ||||   
  GUCUUAUU UCGU UGGUC    ggugc   guuu  a
AA        C    G     CGcc     -ca    ug 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
GL349906.1: 210741-210815 [-]

Database links

Mature api-miR-3045b

Accession MIMAT0014796
Description Acyrthosiphon pisum api-miR-3045b mature miRNA
Sequence 53 - GCCUGGUGUGCUCUUAUUCUGAA - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20444247
    Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
    Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
    BMC Genomics (2010) 11:281