Stem-loop sequence api-mir-3053

AccessionMI0014015 (change log)
DescriptionAcyrthosiphon pisum miR-3053 stem-loop
   --a    a        -     c  gug  gu 
5'    ggua cuuauuca cugug ga   uu  g
      |||| |||||||| ||||| ||   ||   
3'    ccau gaauaagu ggcac cu   ag  u
   aua    g        u     c  aaa  uu 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Acyr_2.0; GCA_000142985.2) Overlapping transcripts
GL350117.1: 223099-223161 [-]
Clustered miRNAs
< 10kb from api-mir-3053
api-mir-3032GL350117.1: 224322-224383 [-]
api-mir-3024GL350117.1: 223576-223639 [-]
api-mir-3016GL350117.1: 223456-223518 [-]
api-mir-3053GL350117.1: 223099-223161 [-]
Database links

Mature sequence api-miR-3053

Accession MIMAT0014795

41 - 


 - 63

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Evidence experimental; Illumina [1]


PMID:20444247 "Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum" Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Mereau A, Nicolas J, Tagu D, Jaubert-Possamai S BMC Genomics. 11:281(2010).