miRBase entry: api-mir-3051-1

Stem-loop api-mir-3051-1


Accession
MI0014010
Description
Acyrthosiphon pisum api-mir-3051-1 precursor miRNA
Gene family
MIPF0001114; mir-3051


Sequence

AAGGAACGUUAAAAACCAUUGUguauauguuuaaauccuuaaauguuaaaacaacaaugguguuuuucguuucuaua
.(((((((..(((.((((((((((..((((((((....))))))))....)).)))))))).)))..)))))))...

Structure
--A       UU   A        -  --au        a 
   AGGAACG  AAA ACCAUUGU gu    auguuuaa u
   |||||||  ||| |||||||| ||    ||||||||  
   ucuuugc  uuu ugguaaca ca    uguaaauu c
aua       uu   g        a  aaau        c 


Annotation confidence Not enough data
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Genome context
GL349714.1: 1085537-1085613 [-]

Database links

Mature api-miR-3051

Accession MIMAT0014792
Description Acyrthosiphon pisum api-miR-3051 mature miRNA
Sequence 1 - AAGGAACGUUAAAAACCAUUGU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20444247
    Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
    Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
    BMC Genomics (2010) 11:281