Stem-loop api-mir-3045a

Accession

MI0014001

Description

Acyrthosiphon pisum api-mir-3045a precursor miRNA

Gene family

MIPF0001120; mir-3045

Sequence

CAGAAUAAGGGCACACUAGAUUAACGuacaaaaccaguuuugaccauauucgccuggugugcucuuauucugaa
(((((((((((((((((((......((.(((((....))))))).........)))))))))))))))))))..

Structure

--                   ---AUUAAC  a     c 
  CAGAAUAAGGGCACACUAG         Gu caaaa c
  |||||||||||||||||||         || |||||  
  gucuuauucucgugugguc         ca guuuu a
aa                   cgcuuauac  -     g 

Annotation confidence Not enough data

Genome context

GL349624.1: 1900945-1901018 [-]

Mature api-miR-3045a

• Accession: MIMAT0014784
• Description: Acyrthosiphon pisum api-miR-3045a mature miRNA
• Sequence: 1 - CAGAAUAAGGGCACACUAGAUUAACG - 26
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20444247
   Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
   Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
   BMC Genomics (2010) 11:281