Stem-loop api-mir-3017b-3

Accession

MI0014000

Description

Acyrthosiphon pisum api-mir-3017b-3 precursor miRNA

Gene family

MIPF0001107; mir-3017

Sequence

ccguguucugugacugacucggcuggcgccggacuggcgggggccagcCGGUCUGUCACGGAACACGGGA
((((((((((((((.(((.((((((((.((.(.....).)).))))))))))).))))))))))))))..

Structure

--              u   u        g  g a 
  ccguguucugugac gac cggcuggc cc g c
  |||||||||||||| ||| |||||||| || | u
  GGCACAAGGCACUG CUG GCcgaccg gg c g
AG              U   -        g  g g 

Annotation confidence Not enough data

Genome context

GL349840.1: 302522-302591 [+]

Mature api-miR-3017b

• Accession: MIMAT0014783
• Description: Acyrthosiphon pisum api-miR-3017b mature miRNA
• Sequence: 49 - CGGUCUGUCACGGAACACGGGA - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20444247
   Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
   Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
   BMC Genomics (2010) 11:281